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The HID EVOlution System for Automation of DNA Quantification and Short Tandem Repeat Analysis

Rixun Fang, Jason Yingjie Liu, Heidi L. Kijenski, Jacki Benfield, Ada Hang‐Heng Wong, Robert Lagacé, Michael J. Cassel, Vivian Nguyen, Wendy M. Lauber, Dirk Abeln, Lynda Treat‐Clemons, Manohar R. Furtado, Jaiprakash G. Shewale

发表年份
2009
引用次数
5

摘要

The HID EVOlution—qPCR/STR Setup System enables automation of DNA quantitative real-time polymerase chain reaction (PCR) setup, normalization of DNA sample, and PCR setup for short tandem repeat (STR) analysis. The HID EVOlution System tracks sample and reagent information and facilitates data transfer of DNA quantification, normalization, and PCR setup for STR analysis steps, eliminating the need for manual processing and repetitive data entry. Instruments for the automated system include a Tecan Freedom EVO 150 robot for liquid handling, the 7500 Real-Time PCR System for DNA quantification, the GeneAmp PCR System 9700 for STR amplification, and the 3130 xl Genetic Analyzer for the detection of amplified STR fragments. Validation studies including reproducibility, accuracy, correlation, and contamination studies were performed. Results demonstrated clean liquid-handling capabilities and maintenance of sample integrity. Variation in average allele peak height obtained using automated protocol was similar to that obtained using the manual protocol.

关键词

STR analysisNormalization (sociology)Polymerase chain reactionMicrosatelliteComputer scienceMultiplexDNAComputational biologyBiologyGenetics

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